Jonathan Todd

Search results

• 2024

  Alternative dimethylsulfoniopropionate biosynthesis enzymes in diverse and abundant microorganisms

  Wang, J., Curson, A. R. J., Zhou, S., Carrión, O., Liu, J., Vieira, A. R., Walsham, K. S., Monaco, S., Li, C-Y., Dong, Q-Y., Wang, Y., Rivera, P. P. L., Wang, X-D., Zhang, M., Hanwell, L., Wallace, M., Zhu, X-Y., Leão, P. N., Lea-Smith, D. J., Zhang, Y-Z., & 2 othersZhang, X-H. & Todd, J. D., Aug 2024, In: Nature Microbiology. 9, 8, p. 1979–1992 14 p.

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• An S-methyltransferase that produces the climate-active gas dimethylsulfide is widespread across diverse marine bacteria

  Zhang, Y., Sun, C., Guo, Z., Liu, L., Zhang, X., Sun, K., Zheng, Y., Gates, A. J., Todd, J. D. & Zhang, X-H., Oct 2024, In: Nature Microbiology. 9, 10, p. 2614–2625 12 p.

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• A unique subseafloor microbiosphere in the Mariana Trench driven by episodic sedimentation

  Liu, J., Li, D-W., He, X., Liu, R., Cheng, H., Su, C., Chen, M., Wang, Y., Zhao, Z., Xu, H., Cheng, Z., Wang, Z., Pedentchouk, N., Lea-Smith, D. J., Todd, J. D., Liu, X., Zhao, M. & Zhang, X-H., Feb 2024, In: Marine Life Science and Technology. 6, 1, p. 168-181 14 p.

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• Elucidation of Spartina dimethylsulfoniopropionate synthesis genes enables engineering of stress tolerant plants

  Payet, R. D., Bilham, L. L., Kabir, S. M. T., Monaco, S., Norcott, A. R., Allen, M. G. E., Zhu, X-Y., Davy, A. J., Brearley, C. A., Todd, J. D. & Miller, J. B., 9 Oct 2024, In: Nature Communications. 15, 8568.

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• 2023

  Aminolipids elicit functional trade-offs between competitiveness and bacteriophage attachment in Ruegeria pomeroyi

  Stirrup, R., Mausz, M. A., Silvano, E., Murphy, A., Guillonneau, R., Quareshy, M., Rihtman, B., Ferretjans, M. A., He, R., Todd, J. D., Chen, F., Scanlan, D. J. & Chen, Y., Mar 2023, In: The ISME Journal. 17, 3, p. 315-325 11 p.

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• Deep-sea Bacteroidetes from the Mariana Trench specialize in hemicellulose and pectin degradation typically associated with terrestrial systems

  Zhu, X-Y., Li, Y., Xue, C-X., Lidbury, I. D. E. A., Todd, J. D., Lea-Smith, D. J., Tian, J., Zhang, X-H. & Liu, J., 7 Aug 2023, In: Microbiome. 11, 175.

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• DMSOP-cleaving enzymes are diverse and widely distributed in marine microorganisms

  Carrion Fonseca, O., Todd, J., Curson, A., Walsham, K., Zhu, X. & Monaco, S., Dec 2023, In: Nature Microbiology. 8, 12, p. 2326-2337 12 p.

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• SAR92 clade bacteria are potentially important DMSP degraders and sources of climate-active gases in marine environments

  He, X-Y., Liu, N-H., Liu, J-Q., Peng, M., Teng, Z-J., Gu, T-J., Chen, X-L., Chen, Y., Wang, P., Li, C-Y., Todd, J. D., Zhang, Y-Z. & Zhang, X-Y., 19 Dec 2023, In: mBIO. 14, 6, e01467-23.

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• Stabilisation of the RirA [4Fe–4S] cluster results in loss of iron-sensing function

  Gray, E., Stewart, M. Y. Y., Hanwell, L., Crack, J. C., Devine, R., Stevenson, C. E. M., Volbeda, A., Johnston, A. W. B., Fontecilla-Camps, J. C., Hutchings, M. I., Todd, J. D. & Le Brun, N. E., 20 Sep 2023, In: Chemical Science. 14, 36, p. 9744-9758 15 p.

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• 2022

  Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp.

  Rix, G. D., Sprigg, C., Whitfield, H., Hemmings, A. M., Todd, J. D. & Brearley, C. A., 31 Aug 2022, In: PLoS One. 17, 8, e0272015.

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• DMSP production by coral-associated bacteria

  Kuek, F. W. I., Motti, C. A., Zhang, J., Cooke, I. R., Todd, J. D., Miller, D. J., Bourne, D. G. & Raina, J-B., 4 May 2022, In: Frontiers in Marine Science. 9, 869574.

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• Insights into methionine S-methylation in diverse organisms

  Peng, M., Li, C-Y., Chen, X-L., Williams, B., Kang, L., Gao, Y-N., Wang, P., Wang, N., Gao, C., Zhang, S., Schoelmerich, M. C., Banfield, J. F., Miller, J. B., Le Brun, N. E., Todd, J. D. & Zhang, Y-Z., 26 May 2022, In: Nature Communications. 13, 2947.

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• Mechanistic insights into the key marine dimethylsulfoniopropionate synthesis enzyme DsyB/DSYB

  Li, C-Y., Crack, J. C., Newton-Payne, S., Murphy, A. R. J., Chen, X-L., Pinchbeck, B. J., Zhou, S., Williams, B. T., Peng, M., Zhang, X-H., Chen, Y., Le Brun, N. E., Todd, J. D. & Zhang, Y-Z., Jun 2022, In: mLife. 1, 2, p. 114-130 17 p.

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• Oceanospirillales containing the DMSP lyase DddD are key utilisers of carbon from DMSP in coastal seawater

  Liu, J., Xue, C-X., Wang, J., Crombie, A. T., Carrión, O., Johnston, A. W. B., Murrell, J. C., Liu, J., Zheng, Y., Zhang, X-H. & Todd, J. D., 27 Jul 2022, In: Microbiome. 10, 110.

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• 2021

  A novel ATP dependent dimethylsulfoniopropionate lyase in bacteria that releases dimethyl sulfide and acryloyl-CoA

  Li, C-Y., Wang, X-J., Chen, X-L., Sheng, Q., Zhang, S., Wang, P., Quareshy, M., Rihtman, B., Shao, X., Gao, C., Li, F., Li, S., Zhang, W., Zhang, X-H., Yang, G-P., Todd, J. D., Chen, Y. & Zhang, Y-Z., 10 May 2021, In: eLife. 10, e64045.

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• Assessing the toxicity and mitigating the impact of harmful Prymnesium blooms in eutrophic waters of the Norfolk Broads

  Wagstaff, B. A., Pratscher, J., Rivera, P. P. L., Hems, E. S., Brooks, E., Rejzek, M., Todd, J. D., Murrell, J. C. & Field, R. A., 21 Dec 2021, In: Environmental Science & Technology. 55, 24, p. 16538–16551 14 p.

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• Bacterial dimethylsulfoniopropionate biosynthesis in the East China Sea

  Liu, J., Zhang, Y., Liu, J., Zhong, H., Williams, B. T., Zheng, Y., Curson, A. R. J., Sun, C., Sun, H., Song, D., Wagner Mackenzie, B., Bermejo Martínez, A., Todd, J. D. & Zhang, X-H., 22 Mar 2021, In: Microorganisms. 9, 3, 657.

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• Dimethylsulfoniopropionate biosynthetic bacteria in the subseafloor sediments of the South China Sea

  Zhang, Y., Sun, K., Sun, C., Shi, X., Todd, J. & Zhang, X-H., 11 Oct 2021, In: Frontiers in Microbiology. 12, 731524.

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• DiTing: A pipeline to infer and compare biogeochemical pathways from metagenomic and metatranscriptomic data

  Xue, C-X., Lin, H., Zhu, X-Y., Liu, J., Zhang, Y., Rowley, G., Todd, J. D., Li, M. & Zhang, X-H., 2 Aug 2021, In: Frontiers in Microbiology. 12, 698286.

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• Improved sensitivity, accuracy and prediction provided by a high-performance liquid chromatography screen for the isolation of phytase-harbouring organisms from environmental samples

  Rix, G., Todd, J., Neal, A. L. & Brearley, C., Jul 2021, In: Microbial Biotechnology. 14, 4, p. 1409-1421 13 p.

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• Spatiotemporal distribution of bacterial dimethylsulfoniopropionate producing and catabolic genes in the Changjiang Estuary

  Sun, H., Liu, J., Tan, S., Zheng, Y., Wang, X., Liang, J., Todd, J. & Zhang, X-H., Nov 2021, In: Environmental Microbiology. 23, 11, p. 7073-7092 20 p.

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• 2020

  Bacteria are important dimethylsulfoniopropionate producers in marine aphotic and high-pressure environments

  Zheng, Y., Wang, J., Zhou, S., Zhang, Y., Liu, J., Xue, C-X., Williams, B., Zhao, X., Zhao, L., Zhu, X-Y., Sun, C., Zhang, H-H., Xiao, T., Yang, G-P., Todd, J. & Zhang, X-H., Dec 2020, In: Nature Communications. 11, 4658 .

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• DMSP-producing bacteria are more abundant in the surface microlayer than subsurface seawater of the East China Sea

  Sun, H., Zhang, Y., Tan, S., Zheng, Y., Zhou, S., Ma, Q., Yang, G-P., Todd, J. & Zhang, X-H., 1 Aug 2020, In: Microbial Ecology. 80, 2, p. 350-365 16 p.

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• Insights into the vertical stratification of microbial ecological roles across the deepest seawater column on Earth

  Xue, C-X., Liu, J., Lea-Smith, D. J., Rowley, G., Lin, H., Zheng, Y., Zhu, X-Y., Liang, J., Ahmad, W., Todd, J. D. & Zhang, X-H., Sep 2020, In: Microorganisms. 8, 9, 21 p., 1309.

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• Metagenomic insights Into the cycling of dimethylsulfoniopropionate and related molecules in the Eastern China Marginal Seas

  Song, D., Zhang, X-H., Liu, J., Zhong, H., Zheng, Y., Zhou, S., Yu, M., Todd, J. & Zhang, X-H., 18 Feb 2020, In: Frontiers in Microbiology. 11, 157.

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• Novel insights into the Thaumarchaeota in the deepest oceans: their metabolism and potential adaptation mechanisms

  Zhong, H., Lehtovirta-Morley, L., Liu, J., Zheng, Y., Lin, H., Song, D., Todd, J., Tian, J. & Zhang, X-H., 1 Jun 2020, In: Microbiome. 8, 1, 16 p., 78.

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• 2019

  A day in the life of marine sulfonates

  Williams, B. & Todd, J., Oct 2019, In: Nature Microbiology. 4, p. 1610-1611 2 p.

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• Bacteria are important dimethylsulfoniopropionate producers in coastal sediments

  Williams, B. T., Cowles, K., Bermejo Martinez, A., Curson, A. R. J., Zheng, Y., Liu, J., Newton-Payne, S., Hind, A. J., Li, C-Y., Rivera, P., Carrion, O., Liu, J., Spurgin, L. G., Brearley, C. A., Mackenzie, B. W., Pinchbeck, B. J., Peng, M., Pratscher, J., Zhang, X-H., Zhang, Y-Z., & 2 othersMurrell, J. C. & Todd, J. D., Nov 2019, In: Nature Microbiology. 4, p. 1815-1825 11 p.

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• Biosynthesis of CdS quantum dots mediated by volatile sulfur compounds released by Antarctic Pseudomonas fragi

  Gallardo-Benavente, C., Carrión, O., Todd, J. D., Pieretti, J. C., Seabra, A. B., Durán, N., Rubilar, O., Pérez-Donoso, J. M. & Quiroz, A., 13 Aug 2019, In: Frontiers in Microbiology. 10, 1866.

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• Mechanisms of iron- and O2-sensing by the [4Fe-4S] cluster of the global iron regulator RirA

  Pellicer Martinez, M. T., Crack, J., Stewart, M., Bradley, J., Svistunenko, D. A., Johnston, A., Cheesman, M., Todd, J. & Le Brun, N., 17 Sep 2019, In: eLife. 8, e47804.

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• Mechanistic insight into 3-methylmercaptopropionate metabolism and kinetical regulation of demethylation pathway in marine dimethylsulfoniopropionate-catabolizing bacteria

  Shao, X., Cao, H-Y., Zhao, F., Ming, P., Wang, P., Li, C-Y., Shi, W-L., Wei, T-D., Yuan, Z., Zhang, X-H., Chen, X-L., Todd, J. D. & Zhang, Y-Z., Apr 2019, In: Molecular Microbiology. 111, 4, p. 1057-1073 17 p.

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• Methanethiol and dimethylsulfide cycling in Stiffkey saltmarsh

  Carrion Fonseca, O., Pratscher, J., Richa, K., Rostant, W., Farhan Ul Haque, M., Murrell, J. & Todd, J., 10 May 2019, In: Frontiers in Microbiology. 10, 1040.

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• Proliferation of hydrocarbon-degrading microbes at the bottom of the Mariana Trench

  Liu, J., Zheng, Y., Lin, H., Wang, X., Li, M., Liu, Y., Yu, M., Zhao, M., Pedentchouk, N., Lea-Smith, D., Todd, J., Magill, C. R., Zhang, W-J., Zhou, S., Song, D., Zhong, H., Xin, Y., Yu, M., Tian, J. & Zhang, X-H., 12 Apr 2019, In: Microbiome. 7, 47.

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• The production and fate of volatile organosulfur compounds in sulfidic and ferruginous sediment

  Wilkening, J. V., Turchyn, A. V., Redeker, K. R., Mills, J. V., Antler, G., Carrión, O. & Todd, J. D., Nov 2019, In: Journal of Geophysical Research: Biogeosciences. 124, 11, p. 3390-3402 13 p.

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• 2018

  Comparative genomics and mutational analysis reveals a novel XoxF-utilizing methylotroph in the Roseobacter group isolated from the marine environment

  Howat, A. M., Vollmers, J., Taubert, M., Grob, C., Dixon, J. L., Todd, J. D., Chen, Y., Kaster, A-K. & Murrell, J. C., 27 Apr 2018, In: Frontiers in Microbiology. 9, 766.

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• DSYB catalyses the key step of dimethylsulfoniopropionate biosynthesis in many phytoplankton

  Curson, A. R. J., Williams, B. T., Pinchbeck, B. J., Sims, L. P., Bermejo Martínez, A., Rivera, P. P. L., Kumaresan, D., Mercadé, E., Spurgin, L. G., Carrión, O., Moxon, S., Cattolico, R. A., Kuzhiumparambil, U., Guagliardo, P., Clode, P. L., Raina, J-B. & Todd, J. D., 1 Apr 2018, In: Nature Microbiology. 3, p. 430–439 10 p.

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• Novel insights into bacterial dimethylsulfoniopropionate catabolism in the East China Sea

  Liu, J., Liu, J., Zhang, S-H., Liang, J., Lin, H., Song, D., Yang, G-P., Todd, J. & Zhang, X-H., 21 Dec 2018, In: Frontiers in Microbiology. 9, 3206.

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• 2017

  Bacterial SBP56 identified as a Cu-dependent methanethiol oxidase widely distributed in the biosphere

  Eyice, Ö., Myronova, N., Pol, A., Carrión, O., Todd, J., Smith, T. J., Gurman, S. J., Cuthbertson, A., Mazard, S., Mennink-Kersten, M. A. S. H., Bugg, T. D. H., Andersson, K. K., Johnston, A. W. B., Op den Camp, H. J. M. & Schäfer, H., 2017, In: The ISME Journal. 12, p. 145–160 16 p.

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• Dimethylsulfoniopropionate biosynthesis in marine bacteria and identification of the key gene in this process

  Curson, A. R. J., Liu, J., Bermejo Martinez, A., Green, R. T., Chan, Y., Carrión, O., Williams, B. T., Zhang, S-H., Yang, G-P., Bulman Page, P. C., Zhang, X-H. & Todd, J. D., 13 Feb 2017, In: Nature Microbiology. 2, 17009.

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• Mechanistic insight into acrylate metabolism and detoxification in marine dimethylsulfoniopropionate-catabolizing bacteria

  Wang, P., Cao, H-Y., Chen, X-L., Li, C-Y., Li, P-Y., Zhang, X-Y., Qin, Q-L., Todd, J. & Zhang, Y-Z., Sep 2017, In: Molecular Microbiology. 105, 5, p. 674–688

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• Mechanistic insights into dimethylsulfoniopropionate lyase DddY, a new member of the cupin superfamily

  Li, C-Y., Zhang, D., Chen, X-L., Wang, P., Shi, W-L., Li, P-Y., Zhang, X-Y., Qin, Q-L., Todd, J. D. & Zhang, Y-Z., 8 Dec 2017, In: Journal of Molecular Biology. 429, 24, p. 3850-3862 13 p.

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• Methanethiol-dependent dimethylsulfide production in soil environments

  Carrión, O., Pratscher, J., Curson, A. R. J., Williams, B. T., Rostant, W. G., Murrell, J. C. & Todd, J. D., Oct 2017, In: The ISME Journal. 11, 10, p. 2379–2390 12 p.

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• Sensing iron availability via the fragile [4Fe-4S] cluster of the bacterial transcriptional repressor RirA

  Pellicer Martinez, M., Bermejo Martinez, A., Crack, J., Holmes, J. D., Svistunenko, D., Johnston, A., Cheesman, M., Todd, J. & Le Brun, N., 2017, In: Chemical Science. 8, p. 8451-8463 13 p.

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• Structural and biochemical insights into dimethylsulfoniopropionate cleavage by cofactor-bound DddK from the prolific marine bacterium Pelagibacter

  Schnicker, N. J., De Silva, S. M., Todd, J. D. & Dey, M., 13 Jun 2017, In: Biochemistry. 56, 23, p. 2873–2885

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• 2016

  Enzymatic breakage of dimethylsulfoniopropionate - a signature molecule for life at sea

  Johnston, A., Green, R. & Todd, J., Apr 2016, In: Current Opinion in Chemical Biology. 31, p. 58-65 8 p.

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• The abundant marine bacterium Pelagibacter simultaneously catabolizes dimethylsulfoniopropionate to the gases dimethyl sulfide and methanethiol

  Sun, J., Todd, J. D., Thrash, J. C., Qian, Y., Qian, M. C., Temperton, B., Guo, J., Fowler, E. K., Aldrich, J. T., Nicora, C. D., Lipton, M. S., Smith, R. D., De Leenheer, P., Payne, S. H., Johnston, A. W. B., Davie-Martin, C. L., Halsey, K. H. & Giovannoni, S. J., 16 May 2016, In: Nature Microbiology. 1, 16065.

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• 2015

  A novel pathway producing dimethylsulphide in bacteria is widespread in soil environments

  Carrion Fonseca, O., Curson, A., Kumaresan, D., Fu, Y., Lang, A. S., Mercadé, E. & Todd, J., 25 Mar 2015, In: Nature Communications. 6, 6579.

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• Biochemical, kinetic, and spectroscopic characterization of Ruegeria pomeroyi DddW - A mononuclear iron-dependent DMSP lyase

  Brummett, A. E., Schnicker, N. J., Crider, A., Todd, J. & Dey, M., 19 May 2015, In: PLoS One. 10, 5, e0127288.

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• 2014

  Screening of metagenomic and genomic libraries reveals three classes of bacterial enzymes that overcome the toxicity of acrylate

  Curson, A. R. J., Burns, O. J., Voget, S., Daniel, R., Todd, J. D., McInnis, K., Wexler, M. & Johnston, A. W. B., 21 May 2014, In: PLoS One. 9, 5, e97660.

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• 2013

  Manganese uptake in marine bacteria; the novel MntX transporter is widespread in Roseobacters, Vibrios, Alteromonadales and the SAR11 and SAR116 clades

  Green, R. T., Todd, J. D. & Johnston, A. W. B., Mar 2013, In: The ISME Journal. 7, 3, p. 581-591 11 p.

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  24 Citations (Scopus)