Projects per year
Personal profile
Career
Dr. Katharina Huber was awarded a PhD in Mathematics from the University of Bielefeld, Bielefeld, Germany, in 1997. After finishing her PhD, she spent two years as a Marsden Postdoctoral fellow at Massey University, Palmerston North, New Zealand, working on problems in Phylogenetics. In the beginning of 2000, she moved to Sundsvall, Sweden, where she joined the Department of Mathematics and Physics as a lecturer in Discrete Mathematics. After two years, she moved to Uppsala, Sweden, where she joined the Department of Biometry and Engineering, The Swedish University of Agricultural Sciences, and the Linnaeus Centre for Bioinformatics. In April 2003, she was awarded the title of a "docent" by Uppsala University. In the summer of 2004, she moved to the United Kingdom where she joined the School of Computing Sciences at UEA. In Aug. 2012 she was promoted to Senior Lecturer. Since Feb. 2011 she has been a member of the London Mathematical Society (LMS).
Research opportunities
Katharina always welcomes enquiries from potential Phd students. She would be particularly keen on recruiting someone to assist her with the development of novel mathematical methodology and algorithms to help understand the complex processes that drive evolution. However she will also seriously consider applicants that would like to work in other any other area of interest to her.
The application round for her competitively funded PhD-studentship (start date 01/10/2023) has now closed. If you would like to do a PhD in the area of Phylogenetics, please feel free to contact her at: [email protected]
Computing Sciences PhD Opportunities
Additional Contacts
Key Responsibilities
Katharina Huber is the School's Director for Postgraduate Research. In addition, she is the School's Deputy Chair for it's Undergraduate Board of Examiners.
Areas of Expertise
Key Research Interests
Katharina Huber is an Associate Professor in Computational Biology and a member of the School's Computational Biology Laboratory. Her research interests range from developing mathematical theory and algorithms to help shed light into the complex processes that drive molecular evolution to the study of combinatorial objects such as cluster systems and (finite) metric spaces. Selected publications from her list of publications may be found below.
Selected Publications
Overlaid species forests. K. T. Huber, V. Moulton, G. E. Scholz. (2022) Discrete Applied Mathematics. 309 110 - 122.
Optimal realizations and the block decomposition of a finite metric space. K. T. Huber, V. Moulton, A. Spillner. (2021) Discrete Applied Mathematics. 302 103 - 113.
The rigid hybrid number for two phylogenetic trees. K. T. Huber, S. Linz, V. Moulton. (2021) Journal of Mathematical Biology. 82 article 40.
Phylogenetic networks that are their own fold-ups, K.T. Huber, G. E. Scholz. (2020) Advances in Applied Mathematics. 113 101959
OSF-Builder: A new tool for constructing and representing phylogenetic histories involving introgression, G. E. Scholz, A.-A. Popescu, M. I. Taylor, V. Moulton, K.T. Huber. (2019) Systematic Biology. 68(5) 717-729.
Collaborations and top research areas from the last five years
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A.I. and Graph Theoretical Approaches to Small Molecule Structure Elucidation
1/10/24 → 30/09/27
Project: Training
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Smart Environments Research Facility
Aung, M. H., Bagnall, T., Buckley, O., Cawley, G., Day, A., De La Iglesia, B., Finlayson, G., Harvey, R., Huber, K., Kulinskaya, E., Laycock, S., Lines, J., Mackiewicz, M., Milner, B., Moulton, V., Parr, G., Ren, E. & Wang, W.
Engineering and Physical Sciences Research Council
10/01/20 → 8/07/22
Project: Research
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A distance-based model for convergent evolution
Holland, B., Huber, K. T. & Moulton, V., 18 Jan 2024, In: Journal of Mathematical Biology. 88, 17.Research output: Contribution to journal › Article › peer-review
Open AccessFile5 Downloads (Pure) -
Is this network proper forest-based?
Huber, K. T., van Iersel, L., Moulton, V. & Scholz, G. E., Jan 2025, In: Information Processing Letters. 187, 106500.Research output: Contribution to journal › Article › peer-review
Open AccessFile7 Downloads (Pure) -
Orienting undirected phylogenetic networks
Huber, K. T., van Iersel, L., Janssen, R., Jones, M., Moulton, V., Murakami, Y. & Semple, C., Mar 2024, In: Journal of Computer and System Sciences. 140, 103480.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Citations (SciVal)7 Downloads (Pure) -
Phylogenetic trees defined by at most three characters
Huber, K. T., Linz, S., Moulton, V. & Semple, C., 15 Nov 2024, In: Electronic Journal of Combinatorics. 31, 4, P4.42.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
Shared ancestry graphs and symbolic arboreal maps
Huber, K. T., Moulton, V. & Scholz, G. E., Dec 2024, In: SIAM Journal on Discrete Mathematics. 38, 4, p. 2553-2577 25 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile
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The 15th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM BCB2024)
Katharina Huber (Member of programme committee)
22 Nov 2024 → 25 Nov 2024Activity: Participating in or organising an event › Participation in conference
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The International Symposium on String Processing and Information Retrieval (SPIRE) 2024
Katharina Huber (Member of programme committee)
2024 → …Activity: Participating in or organising an event › Participation in conference
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Mathematics of Evolution - Phylogenetic trees and networks
Katharina Huber (Speaker)
11 Sep 2023 → 13 Sep 2023Activity: Participating in or organising an event › Invited talk
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Emerging Mathematical Frontiers in Molecular Evolution
Katharina Huber (Organiser)
2022Activity: Participating in or organising an event › Participation in conference
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International Conference on Algorithms and Complexity (CIAC 2021)
Katharina Huber (Speaker)
2021Activity: Participating in or organising an event › Invited talk