PopSeqle: Software for Population Sequence data to Lower Errors

van Oosterhout, Cock (Principal Investigator)
Etherington, Graham (Co-Investigator)
Palma, Federica (Co-Investigator)

Earth and Life Systems Alliance

Earlham Institute

Status	Finished
Effective start/end date	5/09/16 → 4/03/18

Funding

Biotechnology and Biological Sciences Research Council: £151,362.00

5 Article

Albugo candida race diversity, ploidy and host‐associated microbes revealed using DNA sequence capture on diseased plants in the field
Jouet, A., Saunders, D. G. O., McMullan, M., Ward, B., Furzer, O., Jupe, F., Cevik, V., Hein, I., Thilliez, G. J. A., Holub, E., van Oosterhout, C. & Jones, J. D. G., Feb 2019, In: New Phytologist. 221, 3, p. 1529-1543 15 p.
Research output: Contribution to journal › Article › peer-review

Open Access
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30 Citations (Scopus)

15 Downloads (Pure)
Evolutionary genomics of anthroponosis in Cryptosporidium
Nader, J., Mathers, T. C., Ward, B. J., Pachebat, J., Swain, M., Robinson, G., Chalmers, R. M., Hunter, P., van Oosterhout, C. & Tyler, K., 4 Mar 2019, In: Nature Microbiology. 4, 5, p. 826–836 11 p.
Research output: Contribution to journal › Article › peer-review

Open Access
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88 Citations (Scopus)

39 Downloads (Pure)
Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes
Thilliez, G. J. A., Armstrong, M. R., Lim, T-Y., Baker, K., Jouet, A., Ward, B., Van Oosterhout, C., Jones, J. D. G., Huitema, E., Birch, P. R. J. & Hein, I., Feb 2019, In: New Phytologist. 221, 3, p. 1634-1648 15 p.
Research output: Contribution to journal › Article › peer-review

Open Access
File

40 Citations (Scopus)

24 Downloads (Pure)