The UEA Small RNA Workbench: New and improved tools or high throughput small RNA analysis

Research output

Research output per year 2017 2017 2018 2020 2020

• 8 Article

Research output per year

Research output per year

Search results

• 2020

  NATpare: a pipeline for high-throughput prediction and functional analysis of nat-siRNAs

  Thody, J., Folkes, L. & Moulton, V., 9 Jul 2020, In: Nucleic Acids Research. 48, 12, p. 6481–6490 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File
  9 Citations (Scopus)

  18 Downloads (Pure)

• PAREameters: a tool for computational inference of plant miRNA–mRNA targeting rules using small RNA and degradome sequencing data

  Thody, J., Moulton, V. & Mohorianu, I., 18 Mar 2020, In: Nucleic Acids Research. 48, 5, p. 2258–2270 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File
  14 Citations (Scopus)

  19 Downloads (Pure)
• 2018

  PAREsnip2: A tool for high-throughput prediction of small RNA targets from degradome sequencing data using configurable targeting rules

  Thody, J., Folkes, L., Medina-Calzada, Z., Xu, P., Dalmay, T. & Moulton, V., 28 Sep 2018, In: Nucleic Acids Research. 46, 17, p. 8730–8739 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File
  30 Citations (Scopus)

  52 Downloads (Pure)

• The UEA sRNA Workbench (version 4.4): a comprehensive suite of tools for analyzing miRNAs and sRNAs

  Stocks, M. B., Mohorianu, I., Beckers, M., Paicu, C., Moxon, S., Thody, J., Dalmay, T. & Moulton, V., 1 Oct 2018, In: Bioinformatics. 34, 19, p. 3382–3384 3 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File
  41 Citations (Scopus)

  24 Downloads (Pure)
• 2017

  Comprehensive processing of high-throughput small RNA sequencing data including quality checking, normalization, and differential expression analysis using the UEA sRNA Workbench

  Beckers, M., Mohorianu, I-I., Stocks, M., Applegate, C., Dalmay, T. & Moulton, V., Jun 2017, In: RNA. 23, 6, p. 823-835 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File
  22 Citations (Scopus)

  30 Downloads (Pure)

• MicroRNAs associated with caste determination and differentiation in a primitively eusocial insect

  Collins, D. H., Mohorianu, I., Beckers, M., Moulton, V., Dalmay, T. & Bourke, A. F. G., 31 Mar 2017, In: Scientific Reports. 7, 45674.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File
  28 Citations (Scopus)

  27 Downloads (Pure)

• miRCat2: Accurate prediction of plant and animal microRNAs from next-generation sequencing datasets

  Paicu, C., Mohorianu, I-I., Stocks, M., Xu, P., Coince, A., Billmeier, M., Dalmay, T., Moulton, V. & Moxon, S., 15 Aug 2017, In: Bioinformatics. 33, 16, p. 2446–2454 9 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File
  35 Citations (Scopus)

  62 Downloads (Pure)

• Survival prospects after acute myocardial infarction in the UK: a matched cohort study 1987–2011

  Gitsels, L. A., Kulinskaya, E. & Steel, N., 1 Jan 2017, In: BMJ Open. 7, 1, e013570.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File
  8 Citations (Scopus)

  32 Downloads (Pure)