2D-CNN Based Segmentation of Ischemic Stroke Lesions in MRI Scans

Pir Masoom Shah, Hikmat Khan, Uferah Shafi, Saif ul Islam, Mohsin Raza, Tran The Son, Hoa Le-Minh

Research output: Chapter in Book/Report/Conference proceedingConference contribution

12 Citations (Scopus)

Abstract

Stroke is the second overall driving reason for human death and disability. Strokes are categorized into Ischemic and Hemorrhagic strokes. Ischemic stroke is 85% of strokes while hemorrhagic is 15%. An exact automatic lesion segmentation of ischemic stroke remains a test to date. A few machine learning techniques are applied previously to beat manual human observers yet slacks to survive. In this paper, we propose a completely automatic lesion segmentation of ischemic stroke in view of the Convolutional Neural Network (CNN). The dataset used as a part of this study is obtained from ISLES 2015 challenge, included four MRI modalities DWI, T1, T1c, and FLAIR of 28 patients. The CNN model is trained on 25 patient’s data while tested on the remaining 3 patients. As CNN is only used for classification, we convert segmentation to the pixel-by-pixel classification tasks. Dice Coefficient (DC) is used as a performance evaluation metric for assessing the performance of the model. The experimental results show that the proposed model achieves a comparatively higher DC rate from 4–5% than the considered state-of-the-art machine learning techniques.

Original languageEnglish
Title of host publicationAdvances in Computational Collective Intelligence - 12th International Conference, ICCCI 2020, Proceedings
EditorsMarcin Hernes, Krystian Wojtkiewicz, Edward Szczerbicki
PublisherSpringer
Pages276-286
Number of pages11
ISBN (Print)9783030631185
DOIs
Publication statusPublished - 2020
Event12th International Conference on International Conference on Computational Collective Intelligence, ICCCI 2020 - Da Nang, Viet Nam
Duration: 30 Nov 20203 Dec 2020

Publication series

NameCommunications in Computer and Information Science
Volume1287
ISSN (Print)1865-0929
ISSN (Electronic)1865-0937

Conference

Conference12th International Conference on International Conference on Computational Collective Intelligence, ICCCI 2020
Country/TerritoryViet Nam
CityDa Nang
Period30/11/203/12/20

Keywords

  • Convolutional Neural Network
  • Deep learning
  • MRI
  • Stroke

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