A toolkit for analysing large-scale plant small RNA datasets

Simon Moxon, Frank Schwach, Tamas Dalmay, Dan MacLean, David J. Studholme, Vincent Moulton

Research output: Contribution to journalArticlepeer-review

228 Citations (Scopus)

Abstract

Recent developments in high-throughput sequencing technologies have generated considerable demand for tools to analyse large datasets of small RNA sequences. Here, we describe a suite of web-based tools for processing plant small RNA datasets. Our tools can be used to identify micro RNAs and their targets, compare expression levels in sRNA loci, and find putative trans-acting siRNA loci.
Original languageEnglish
Pages (from-to)2252-2253
Number of pages2
JournalBioinformatics
Volume24
Issue number19
DOIs
Publication statusPublished - 2008

Cite this