TY - JOUR
T1 - Glucose-1-phosphate uridylyltransferase from Erwinia amylovora
T2 - Activity, structure and substrate specificity
AU - Benini, Stefano
AU - Toccafondi, Mirco
AU - Rejzek, Martin
AU - Musiani, Francesco
AU - Wagstaff, Ben A.
AU - Wuerges, Jochen
AU - Cianci, Michele
AU - Field, Robert A.
N1 - Funding Information:
This work was supported by the Autonomous Province of Bolzano (project 98 : “A structural genomics approach for the study of the virulence and pathogenesis of Erwinia amylovora ”), by the Free University of Bolzano (project 103 GAMEs: Galactose and glucuronic acid metabolism in Erwinia spp ), by the Faculty of Science and Technology (project 1466 , MACSIMA I: MAthematics, Chemistry, Statistics: Innovative Methods for Applications I), by the UK BBSRC Institute Strategic Programme Grant on Understanding and Exploiting Metabolism (MET) [ BB/J004561/1 ] and by the John Innes Foundation . F.M. was supported by CIRMMP (Consorzio Interuniversitario di Risonanze Magnetiche di Metallo-Proteine).
Publisher Copyright:
© 2017 Elsevier B.V.
PY - 2017/11
Y1 - 2017/11
N2 - Erwinia amylovora, a Gram-negative plant pathogen, is the causal agent of Fire Blight, a contagious necrotic disease affecting plants belonging to the Rosaceae family, including apple and pear. E. amylovora is highly virulent and capable of rapid dissemination in orchards; effective control methods are still lacking. One of its most important pathogenicity factors is the exopolysaccharide amylovoran. Amylovoran is a branched polymer made by the repetition of units mainly composed of galactose, with some residues of glucose, glucuronic acid and pyruvate. E. amylovora glucose-1-phosphate uridylyltransferase (UDP-glucose pyrophosphorylase, EC 2.7.7.9) has a key role in amylovoran biosynthesis. This enzyme catalyses the production of UDP-glucose from glucose-1-phosphate and UTP, which the epimerase GalE converts into UDP-galactose, the main building block of amylovoran. We determined EaGalU kinetic parameters and substrate specificity with a range of sugar 1-phosphates. At time point 120 min the enzyme catalysed conversion of the sugar 1-phosphate into the corresponding UDP-sugar reached 74% for N-acetyl-α-D-glucosamine 1-phosphate, 28% for α-D-galactose 1-phosphate, 0% for α-D-galactosamine 1-phosphate, 100% for α-D-xylose 1-phosphate, 100% for α-D-glucosamine 1-phosphate, 70% for α-D-mannose 1-phosphate, and 0% for α-D-galacturonic acid 1-phosphate. To explain our results we obtained the crystal structure of EaGalU and augmented our study by docking the different sugar 1-phosphates into EaGalU active site, providing both reliable models for substrate binding and enzyme specificity, and a rationale that explains the different activity of EaGalU on the sugar 1-phosphates used. These data demonstrate EaGalU potential as a biocatalyst for biotechnological purposes, as an alternative to the enzyme from Escherichia coli, besides playing an important role in E. amylovora pathogenicity.
AB - Erwinia amylovora, a Gram-negative plant pathogen, is the causal agent of Fire Blight, a contagious necrotic disease affecting plants belonging to the Rosaceae family, including apple and pear. E. amylovora is highly virulent and capable of rapid dissemination in orchards; effective control methods are still lacking. One of its most important pathogenicity factors is the exopolysaccharide amylovoran. Amylovoran is a branched polymer made by the repetition of units mainly composed of galactose, with some residues of glucose, glucuronic acid and pyruvate. E. amylovora glucose-1-phosphate uridylyltransferase (UDP-glucose pyrophosphorylase, EC 2.7.7.9) has a key role in amylovoran biosynthesis. This enzyme catalyses the production of UDP-glucose from glucose-1-phosphate and UTP, which the epimerase GalE converts into UDP-galactose, the main building block of amylovoran. We determined EaGalU kinetic parameters and substrate specificity with a range of sugar 1-phosphates. At time point 120 min the enzyme catalysed conversion of the sugar 1-phosphate into the corresponding UDP-sugar reached 74% for N-acetyl-α-D-glucosamine 1-phosphate, 28% for α-D-galactose 1-phosphate, 0% for α-D-galactosamine 1-phosphate, 100% for α-D-xylose 1-phosphate, 100% for α-D-glucosamine 1-phosphate, 70% for α-D-mannose 1-phosphate, and 0% for α-D-galacturonic acid 1-phosphate. To explain our results we obtained the crystal structure of EaGalU and augmented our study by docking the different sugar 1-phosphates into EaGalU active site, providing both reliable models for substrate binding and enzyme specificity, and a rationale that explains the different activity of EaGalU on the sugar 1-phosphates used. These data demonstrate EaGalU potential as a biocatalyst for biotechnological purposes, as an alternative to the enzyme from Escherichia coli, besides playing an important role in E. amylovora pathogenicity.
KW - Amylovoran
KW - Biotechnology
KW - Erwinia amylovora
KW - GalU
KW - Molecular docking
KW - UDP-glucose pyrophosphorylase
UR - http://www.scopus.com/inward/record.url?scp=85028924505&partnerID=8YFLogxK
U2 - 10.1016/j.bbapap.2017.08.015
DO - 10.1016/j.bbapap.2017.08.015
M3 - Article
C2 - 28844747
AN - SCOPUS:85028924505
VL - 1865
SP - 1348
EP - 1357
JO - Biochimica et Biophysica Acta - Proteins and Proteomics
JF - Biochimica et Biophysica Acta - Proteins and Proteomics
SN - 1570-9639
IS - 11
ER -