High quality de novo sequencing and assembly of the saccharomyces arboricolus genome

Gianni Liti; Alex N. Nguyen Ba; Martin Blythe; Carolin A. Müller; Anders Bergström; Francisco A. Cubillos; Felix Dafhnis-Calas; Shima Khoshraftar; Sunir Malla; Neel Mehta; Cheuk C. Siow; Jonas Warringer; Alan M. Moses; Edward J. Louis; Conrad A. Nieduszynski

doi:10.1201/b16586

High quality de novo sequencing and assembly of the saccharomyces arboricolus genome

Gianni Liti, Alex N. Nguyen Ba, Martin Blythe, Carolin A. Müller, Anders Bergström, Francisco A. Cubillos, Felix Dafhnis-Calas, Shima Khoshraftar, Sunir Malla, Neel Mehta, Cheuk C. Siow, Jonas Warringer, Alan M. Moses, Edward J. Louis, Conrad A. Nieduszynski

School of Biological Sciences

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Abstract

The budding yeast, Saccharomyces cerevisiae, is a leading system in genomics due to the small genome size (12 Mb) and the availability of powerful genetic techniques. Genome sequencing of multiple hemiascomycete yeasts and multiple individuals from several species have allowed the application of a range of powerful comparative approaches. Comparative genomics have revealed evolutionary mechanisms that shape genomes and provided a formidable tool for assigning function to DNA sequence [1,2].

Original language	English
Title of host publication	Investigations in Yeast Functional Genomics and Molecular Biology
Publisher	Apple Academic Press
Pages	283-310
Number of pages	28
ISBN (Electronic)	9781482240962
ISBN (Print)	9781771880107
DOIs	https://doi.org/10.1201/b16586
Publication status	Published - 1 Jan 2014

Access to Document

10.1201/b16586

Cite this

Liti, G., Nguyen Ba, A. N., Blythe, M., Müller, C. A., Bergström, A., Cubillos, F. A., Dafhnis-Calas, F., Khoshraftar, S., Malla, S., Mehta, N., Siow, C. C., Warringer, J., Moses, A. M., Louis, E. J., & Nieduszynski, C. A. (2014). High quality de novo sequencing and assembly of the saccharomyces arboricolus genome. In Investigations in Yeast Functional Genomics and Molecular Biology (pp. 283-310). Apple Academic Press. https://doi.org/10.1201/b16586

@inbook{903e0931cca940a9887999b699d4b37f,

title = "High quality de novo sequencing and assembly of the saccharomyces arboricolus genome",

abstract = "The budding yeast, Saccharomyces cerevisiae, is a leading system in genomics due to the small genome size (12 Mb) and the availability of powerful genetic techniques. Genome sequencing of multiple hemiascomycete yeasts and multiple individuals from several species have allowed the application of a range of powerful comparative approaches. Comparative genomics have revealed evolutionary mechanisms that shape genomes and provided a formidable tool for assigning function to DNA sequence [1,2].",

author = "Gianni Liti and {Nguyen Ba}, {Alex N.} and Martin Blythe and M{\"u}ller, {Carolin A.} and Anders Bergstr{\"o}m and Cubillos, {Francisco A.} and Felix Dafhnis-Calas and Shima Khoshraftar and Sunir Malla and Neel Mehta and Siow, {Cheuk C.} and Jonas Warringer and Moses, {Alan M.} and Louis, {Edward J.} and Nieduszynski, {Conrad A.}",

note = "Publisher Copyright: {\textcopyright} 2014 by Apple Academic Press, Inc.",

year = "2014",

month = jan,

day = "1",

doi = "10.1201/b16586",

language = "English",

isbn = "9781771880107",

pages = "283--310",

booktitle = "Investigations in Yeast Functional Genomics and Molecular Biology",

publisher = "Apple Academic Press",

}

Liti, G, Nguyen Ba, AN, Blythe, M, Müller, CA, Bergström, A, Cubillos, FA, Dafhnis-Calas, F, Khoshraftar, S, Malla, S, Mehta, N, Siow, CC, Warringer, J, Moses, AM, Louis, EJ & Nieduszynski, CA 2014, High quality de novo sequencing and assembly of the saccharomyces arboricolus genome. in Investigations in Yeast Functional Genomics and Molecular Biology. Apple Academic Press, pp. 283-310. https://doi.org/10.1201/b16586

TY - CHAP

T1 - High quality de novo sequencing and assembly of the saccharomyces arboricolus genome

AU - Liti, Gianni

AU - Nguyen Ba, Alex N.

AU - Blythe, Martin

AU - Müller, Carolin A.

AU - Bergström, Anders

AU - Cubillos, Francisco A.

AU - Dafhnis-Calas, Felix

AU - Khoshraftar, Shima

AU - Malla, Sunir

AU - Mehta, Neel

AU - Siow, Cheuk C.

AU - Warringer, Jonas

AU - Moses, Alan M.

AU - Louis, Edward J.

AU - Nieduszynski, Conrad A.

PY - 2014/1/1

Y1 - 2014/1/1

N2 - The budding yeast, Saccharomyces cerevisiae, is a leading system in genomics due to the small genome size (12 Mb) and the availability of powerful genetic techniques. Genome sequencing of multiple hemiascomycete yeasts and multiple individuals from several species have allowed the application of a range of powerful comparative approaches. Comparative genomics have revealed evolutionary mechanisms that shape genomes and provided a formidable tool for assigning function to DNA sequence [1,2].

AB - The budding yeast, Saccharomyces cerevisiae, is a leading system in genomics due to the small genome size (12 Mb) and the availability of powerful genetic techniques. Genome sequencing of multiple hemiascomycete yeasts and multiple individuals from several species have allowed the application of a range of powerful comparative approaches. Comparative genomics have revealed evolutionary mechanisms that shape genomes and provided a formidable tool for assigning function to DNA sequence [1,2].

UR - http://www.scopus.com/inward/record.url?scp=85054263365&partnerID=8YFLogxK

U2 - 10.1201/b16586

DO - 10.1201/b16586

M3 - Chapter

AN - SCOPUS:85054263365

SN - 9781771880107

SP - 283

EP - 310

BT - Investigations in Yeast Functional Genomics and Molecular Biology

PB - Apple Academic Press

ER -

High quality de novo sequencing and assembly of the saccharomyces arboricolus genome

Abstract

Access to Document

Other files and links

Cite this