Optimal realizations and the block decomposition of a finite metric space

Katharina Huber, Vincent Moulton, Andreas Spillner

Research output: Contribution to journalArticlepeer-review

Abstract

Finite metric spaces are an essential tool in discrete mathematics and have applications in several areas including computational biology, image analysis, speech recognition, and information retrieval. Given any such metric \(D\) on a finite set \(X\), an important problem is to find appropriate~ways to \emph{realize}~$D$ by weighting the edges in some graph~\(G\) containing \(X\) in its vertex set such that \(D(x,y)\) equals the length of a shortest path
from \(x\) to \(y\) in \(G\) for all \(x,y \in\nobreak X\). Here we focus on realizations with minimum total edge weight, called \emph{optimal} realizations. By considering the 2-connected components and bridges in any optimal realization $G$ of $D$ we obtain an additive decomposition of \(D\) into simpler
metrics. We show that this decomposition, called the \emph{block decomposition}, is canonical in that it only depends on $D$ and {\em not} on $G$, and that the decomposition can be computed in $O(|X|^3)$ time. As well as providing a fundamental new way to decompose any finite metric space, we expect that the block decomposition will provide a useful preprocessing tool for deriving metric realizations.
Original languageEnglish
Pages (from-to)103-113
Number of pages11
JournalDiscrete Applied Mathematics
Volume302
Early online date2 Jul 2021
DOIs
Publication statusPublished - 30 Oct 2021

Keywords

  • Block decomposition
  • Block realization
  • Cut points
  • Finite metric space
  • Optimal realization

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