OriDB, the DNA replication origin database updated and extended

Cheuk C. Siow, Sian R. Nieduszynska, Carolin A. Müller, Conrad A. Nieduszynski

Research output: Contribution to journalArticlepeer-review

95 Citations (Scopus)

Abstract

OriDB (http://www.oridb.org/) is a database containing collated genome-wide mapping studies of confirmed and predicted replication origin sites. The original database collated and curated Saccharomyces cerevisiae origin mapping studies. Here, we report that the OriDB database and web site have been revamped to improve user accessibility to curated data sets, to greatly increase the number of curated origin mapping studies, and to include the collation of replication origin sites in the fission yeast Schizosaccharomyces pombe. The revised database structure underlies these improvements and will facilitate further expansion in the future. The updated OriDB for S. cerevisiae is available at http://cerevisiae.oridb.org/ and for S. pombe at http://pombe.oridb.org/.

Original languageEnglish
Pages (from-to)D682-D686
JournalNucleic Acids Research
Volume40
Issue numberD1
DOIs
Publication statusPublished - Jan 2012

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