Solution, crystal and in silico structures of the organometallic vitamin B12-derivative acetylcobalamin and of its novel rhodium-analogue acetylrhodibalamin

Markus Wiedemair, Christoph Kieninger, Klaus Wurst, Maren Podewitz, Evelyne Deery, Michael D. Paxhia, Martin J. Warren, Bernhard Kräutler

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Abstract

The natural vitamin B12-derivatives are intriguing complexes of cobalt that entrap the metal within the strikingly skewed and ring-contracted corrin ligand. Here, we describe the synthesis of the Rh(III)-corrin acetylrhodibalamin (AcRhbl) from biotechnologically produced metal-free hydrogenobyric acid and analyze the effect of the replacement of the cobalt-center of the organometallic vitamin B12-derivative acetylcobalamin (AcCbl) with its group-IX homologue rhodium, to give AcRhbl. The structures of AcCbl and AcRhbl were thoroughly analyzed in aqueous solution, in crystals and by in silico methods, in order to gain detailed insights into the structural adaptations to the two homologous metals. Indeed, the common, nucleotide-appended corrin-ligand in these two metal corrins features extensive structural similarity. Thus, the rhodium-corrin AcRhbl joins the small group of B12-mimics classified as ‘antivitamins B12’, isostructural metal analogues of the natural cobalt-corrins that hold significant potential in biological and biomedical applications as selective inhibitors of key cellular processes.

Original languageEnglish
Article numbere202200158
JournalHelvetica Chimica Acta
Volume106
Issue number2
Early online date12 Dec 2022
DOIs
Publication statusPublished - Feb 2023

Keywords

  • antivitamin B
  • cobalt
  • corrin
  • density functional calculations
  • organometallic chemistry
  • rhodium
  • Salmonella
  • transition metals
  • X-ray diffraction

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