Three-dimensional rendering of otolith growth using phase contrast synchrotron tomography

James Mapp; Mark Fisher; Robert Atwood; Duncan Bell; Mark Greco; Sally Songer; Ewan Hunter

doi:10.1111/jfb.12949

Three-dimensional rendering of otolith growth using phase contrast synchrotron tomography

James Mapp, Mark Fisher, Robert Atwood, Duncan Bell, Mark Greco, Sally Songer, Ewan Hunter

Research output: Contribution to journal › Article › peer-review

11 Citations (Scopus)

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Abstract

We present a three-dimensional computer reconstruction of a plaice (Pleuronectes platessa) otolith from data acquired by the Diamond Light synchrotron, beamline I12, X-ray source, a high energy (53 – 150 keV) source particularly well suited to the study of dense objects. Our data allowed non-destructive rendering of otolith structure, and for the first time allows examination of otolith annuli (internal ring structures) to be analysed in X-ray tomographic images.

Original language	English
Pages (from-to)	2075–2080
Number of pages	6
Journal	Journal of Fish Biology
Volume	88
Issue number	5
Early online date	13 Apr 2016
DOIs	https://doi.org/10.1111/jfb.12949
Publication status	Published - May 2016

Keywords

3-D Reconstruction
Fish Ageing
Otolith Growth
Phase Contrast
Synchrotron Tomography

Access to Document

10.1111/jfb.12949

MS 15-592_R1Accepted author manuscript, 1.32 MB

Cite this

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title = "Three-dimensional rendering of otolith growth using phase contrast synchrotron tomography",

abstract = "We present a three-dimensional computer reconstruction of a plaice (Pleuronectes platessa) otolith from data acquired by the Diamond Light synchrotron, beamline I12, X-ray source, a high energy (53 – 150 keV) source particularly well suited to the study of dense objects. Our data allowed non-destructive rendering of otolith structure, and for the first time allows examination of otolith annuli (internal ring structures) to be analysed in X-ray tomographic images. ",

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AU - Mapp, James

AU - Fisher, Mark

AU - Atwood, Robert

AU - Bell, Duncan

AU - Greco, Mark

AU - Songer, Sally

AU - Hunter, Ewan

PY - 2016/5

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AB - We present a three-dimensional computer reconstruction of a plaice (Pleuronectes platessa) otolith from data acquired by the Diamond Light synchrotron, beamline I12, X-ray source, a high energy (53 – 150 keV) source particularly well suited to the study of dense objects. Our data allowed non-destructive rendering of otolith structure, and for the first time allows examination of otolith annuli (internal ring structures) to be analysed in X-ray tomographic images.

KW - 3-D Reconstruction

KW - Fish Ageing

KW - Otolith Growth

KW - Phase Contrast

KW - Synchrotron Tomography

U2 - 10.1111/jfb.12949

DO - 10.1111/jfb.12949

M3 - Article

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